miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|211677272|gb|GE537487.1|GE537487 AAACAAACTTTTCCCTCTTTTTCTACATTTGATCGAATTAGGGAATAAGCAACAAAAGCCCCAACAAATTCGGGTTCAAT
TTCGTTTTTGTTGTTTTTGAATTGAAATGCTAAAGAAATTAGGTTGAATTGAAGGGAGAAATAGAGATGGTGGTGAGGAA
AGTTGGGAAGTATGAGGTTGGGAGGACGATCGGTGAAGGAACTTTCGCGAAGGTGAAGTTTGCTCAGAATACAGAGACTG
GTGAAAGTGTTGCTATGAAAATTCTCGATCGAGCTACTATAATTAAGCATAAAATGGTGGATCAGATCAAGAGGGAGATA
TCTATAATGAAGCTTGTTAGACATCCCAATGTTGTTCGGCTGCACGAGGTATTAGCTAGTCGCACAAAAATATACATAAT
CTTGGAGTTCATCACAGGCGGTGAGCTATTTGATAAAATTGTCCATCATGGACGGCTCAGTGAAGCTGAATCTCGAAGAT
ACTTTCAGCAGCTCATTGATGGTGTGGAGTATTGCCACATTAAAGGAGTATACCATAGAGATCTGAAGCCAGAAAATCTT
TTACTAGATTCC




Most similar to sp|Q9STV4|CIPK8_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9STV4|CIPK8_ARATH CBL-interacting serine/threonine-protein
           kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1
          Length = 445

 Score =  254 bits (648), Expect = 3e-67
 Identities = 127/142 (89%), Positives = 137/142 (96%)
 Frame = +3

Query: 147 MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKILDRATIIKHKMVDQIKREISI 326
           MVVRKVGKYE+GRTIGEGTFAKVKFAQNTETGESVAMKI+DR+TIIK KMVDQIKREISI
Sbjct: 1   MVVRKVGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISI 60

Query: 327 MKLVRHPNVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRLSEAESRRYFQQLIDGV 506
           MKLVRHP VVRL+EVLASRTKIYIILE+ITGGELFDKIV +GRLSE+E+R+YF QLIDGV
Sbjct: 61  MKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGV 120

Query: 507 EYCHIKGVYHRDLKPENLLLDS 572
           +YCH KGVYHRDLKPENLLLDS
Sbjct: 121 DYCHSKGVYHRDLKPENLLLDS 142